Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs59344095 | chr3:197174959 | T/C | 1.5E-5 | 278 | 25.02 | 26.8 | 18.45 | KM Plot |
| KIRP | rs59379388 | chr20:6082598 | C/T | 6.19E-5 | 287 | 26.38 | 23.42 | 12.1 | KM Plot |
| KIRP | rs59506403 | chr3:125822237 | G/A | 6.84E-5 | 286 | 26.4 | 22.58 | 10.08 | KM Plot |
| KIRP | rs59556663 | chr12:50151010 | A/G | 1.25E-6 | 276 | 26 | 23.62 | 10.97 | KM Plot |
| KIRP | rs59597792 | chr1:231530291 | ATTTT/A | 9.81E-5 | 283 | 20.6 | 27.1 | 25.37 | KM Plot |
| KIRP | rs59635965 | chr9:21449978 | A/G | 2.72E-5 | 280 | 26.1 | 24.67 | 19.5 | KM Plot |
| KIRP | rs59689332 | chr11:47037806 | G/A | 7.75E-12 | 288 | 25.57 | 28.03 | 10.82 | KM Plot |
| KIRP | rs59709198 | chr6:148665362 | A/G | 9.7E-5 | 286 | 26.4 | 18.67 | 18.2 | KM Plot |
| KIRP | rs59802517 | chr16:1009822 | C/T | 0.000155 | 281 | 26.77 | 22.68 | 11.17 | KM Plot |
| KIRP | rs59825837 | chr19:16543445 | T/C | 9.78E-9 | 289 | 26 | 21.97 | 11.37 | KM Plot |
| KIRP | rs59918187 | chr2:128635572 | G/A | 1.5E-9 | 285 | 25.82 | 22.17 | 4.98 | KM Plot |
| KIRP | rs59925733 | chr16:997475 | C/T | 5.54E-5 | 279 | 26.8 | 22.57 | 9.5 | KM Plot |
| KIRP | rs59953272 | chr10:88247502 | A/T | 2.03E-8 | 287 | 26.38 | 22.1 | 9.77 | KM Plot |
| KIRP | rs5995860 | chr22:40852671 | A/G | 8.51E-5 | 287 | 26.4 | 22.8 | 12.1 | KM Plot |
| KIRP | rs5995862 | chr22:40857793 | A/C | 8.74E-5 | 286 | 26.4 | 24.67 | 12.1 | KM Plot |